PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523690.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 780aa MW: 89244.3 Da PI: 6.4435

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.8	8.5e-24	94	180	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA+ vGF +++++s++skr+g++++ + Cs+ g+++e++++ ++r+ +tgC+a++++kk++dgkw v+ + eHnHe++p XP_023523690.1 94 SFYREYARFVGFGITIKASRRSKRSGKFIDIKIACSRFGSKRESTTT----VKPRPCMKTGCDASIHIKKREDGKWFVHAFIREHNHEICP 180 5**************************************998877....99*********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MDIDLELPSS DQERLGIIDS KNDGMDLDQT HGEGRAANSP TRAELSQGVS IPNTETSSVR 60 DQMDIVNVGI NHIMGPAFEP KIGLEFESKE EAYSFYREYA RFVGFGITIK ASRRSKRSGK 120 FIDIKIACSR FGSKRESTTT VKPRPCMKTG CDASIHIKKR EDGKWFVHAF IREHNHEICP 180 DDFLYALKGK NKNPDIVASE KNGLQLALDE GDVHLMLEHF MHMQEMNPNF FYAVDFNQEK 240 QLRSVLWVDA KARHDYKNFS DVILFDTHYI SSGYQIPFVP IVGVNHHFQY VLFGGALIGD 300 MATSSFIWLM KTWLKAVGGP APSVVLTDRE SFLKEAVADV FPKAMHLFSL WHILTRVREK 360 LGKIIDQNRN FMESFDKCIY GSWRDEEFEK KWWEMVEKFE VRENEWLQLL FDDHKKWVPS 420 YVKNYFLAGM CTSERSGSVA SFFDNYISKE TTFKEFVERS EIFSKDMLEL EADADFETRH 480 QEPALKSLSP FEQQTATIYV TTIFKKFQLE VVGAASCRVH EQTEDGAIVT YQVDDLEEQQ 540 KFLVAWNKAE LDIRCRCRSF EHRGILCRHA ILVLQVSGVT SIPQKYVLKR WTISAKVRLS 600 ESSNRLHYRV ARFNHLCKQA IRLSEVGSLS RETYDIAFDA LEDVLKQCVF VNNSNKSFAE 660 TNMVSVGFVD VEEDDCGEDM AKSSRKKKTI KKGKITKQAR YKTSEAEVDS RAAALDGCTN 720 SQIRLKAMQS LDQSPSVVAR VGPCDDRQTI QSLGQLNPRE PGALGRFDIE NNLQDMLDDA

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MDIDLELPSS DQERLGIIDS KNDGMDLDQT HGEGRAANSP TRAELSQGVS IPNTETSSVR  60
DQMDIVNVGI NHIMGPAFEP KIGLEFESKE EAYSFYREYA RFVGFGITIK ASRRSKRSGK  120
FIDIKIACSR FGSKRESTTT VKPRPCMKTG CDASIHIKKR EDGKWFVHAF IREHNHEICP  180
DDFLYALKGK NKNPDIVASE KNGLQLALDE GDVHLMLEHF MHMQEMNPNF FYAVDFNQEK  240
QLRSVLWVDA KARHDYKNFS DVILFDTHYI SSGYQIPFVP IVGVNHHFQY VLFGGALIGD  300
MATSSFIWLM KTWLKAVGGP APSVVLTDRE SFLKEAVADV FPKAMHLFSL WHILTRVREK  360
LGKIIDQNRN FMESFDKCIY GSWRDEEFEK KWWEMVEKFE VRENEWLQLL FDDHKKWVPS  420
YVKNYFLAGM CTSERSGSVA SFFDNYISKE TTFKEFVERS EIFSKDMLEL EADADFETRH  480
QEPALKSLSP FEQQTATIYV TTIFKKFQLE VVGAASCRVH EQTEDGAIVT YQVDDLEEQQ  540
KFLVAWNKAE LDIRCRCRSF EHRGILCRHA ILVLQVSGVT SIPQKYVLKR WTISAKVRLS  600
ESSNRLHYRV ARFNHLCKQA IRLSEVGSLS RETYDIAFDA LEDVLKQCVF VNNSNKSFAE  660
TNMVSVGFVD VEEDDCGEDM AKSSRKKKTI KKGKITKQAR YKTSEAEVDS RAAALDGCTN  720
SQIRLKAMQS LDQSPSVVAR VGPCDDRQTI QSLGQLNPRE PGALGRFDIE NNLQDMLDDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	0.0	FAR1 family protein