PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523572.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 144aa    MW: 16336.2 Da    PI: 9.7248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.3e-182574255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+G+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  XP_023523572.1 25 QYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDTAVFYLRG 74
                    7******99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MEGQVCSGVS SSTEKRKQRH QQQKQYRGIR MRKWGKWVAE IREPNKRSRI WLGSYTTPVA  60
AARAYDTAVF YLRGPSARLN FPESIFEEDQ LQDVSAASIR KRATEIGARV DAIQTSLLAS  120
NSNSQISEKP DLNQYPNPES SDDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.12e-51ERF family protein