PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523531.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 448aa MW: 48922.2 Da PI: 6.3562

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.1	2.2e-39	109	169	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrk+k+s XP_023523531.1 109 PDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSA 169 78999****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MFDSSKDPSF TLFGRKIPLS DDGEPPPIHS HAHDSPSDKD TPPGKESTVD DDDDEKTVDD 60 SDDSINLDAG EEVSVNPKTP SIDEEEAANP SNGKPESENS NSEKTLKKPD KLLPCPRCKS 120 METKFCYYNN YNVNQPRHFC KACQRYWTAG GTMRNVPVGA GRRKSKNSAS YYRHITISEA 180 LDAARIEPPN GTDKPKFICN NGRVLSFNME SQNSDTMVRS VLNLAENRVL SNGVKKFEEK 240 GSEVCDKSSN LSSMAVQSSS ESHTQKINGF PSQISCLSGV PWPFVWNSSV PPPAFCPPGF 300 PSLTFVPAAA WNCGAPGPWN TTWFSPQASS AEKSLCSDTK ASSTLGKHQR DNEIAKEEGI 360 SSKEEGLKQR NGYVLTPKTL RIDDPSEAAK SSIWATLGIK NESITGGKNL FKTFQPKGHE 420 KPHIAETSSV LQANPAALSR SLVFHESS

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MFDSSKDPSF TLFGRKIPLS DDGEPPPIHS HAHDSPSDKD TPPGKESTVD DDDDEKTVDD  60
SDDSINLDAG EEVSVNPKTP SIDEEEAANP SNGKPESENS NSEKTLKKPD KLLPCPRCKS  120
METKFCYYNN YNVNQPRHFC KACQRYWTAG GTMRNVPVGA GRRKSKNSAS YYRHITISEA  180
LDAARIEPPN GTDKPKFICN NGRVLSFNME SQNSDTMVRS VLNLAENRVL SNGVKKFEEK  240
GSEVCDKSSN LSSMAVQSSS ESHTQKINGF PSQISCLSGV PWPFVWNSSV PPPAFCPPGF  300
PSLTFVPAAA WNCGAPGPWN TTWFSPQASS AEKSLCSDTK ASSTLGKHQR DNEIAKEEGI  360
SSKEEGLKQR NGYVLTPKTL RIDDPSEAAK SSIWATLGIK NESITGGKNL FKTFQPKGHE  420
KPHIAETSSV LQANPAALSR SLVFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-98	Dof family protein