PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523407.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 549aa MW: 59864.6 Da PI: 7.4522

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.7	1.2e-33	204	261	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_023523407.1 204 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 261 8**************************************.*************85 PP
2	WRKY	106	1.9e-33	372	430	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnhe XP_023523407.1 372 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHE 430 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MASSSGSLDT SANSHPSFTF STHPFMTTSY SDLLAAGSND LPSSAAAHGA HRGSGTGVPK 60 FKSLPPPSLP LLPPTLIPSS LFSIPPGLSP TELLDSPVLL SASYVLPSPT TGSFPSQSLN 120 WKNNSGYNQQ SIKEENKFLS EFSFLTQSSQ PPTSFQPAPT TEGKKQDGSM QSFSPEYGIV 180 QNQSQNNAGR DYPQQSQTVN RRSDDGYNWR KYGQKQVKGS ENPRSYYKCT FPNCPTKKKV 240 ERSLDGQITE IVYKGSHNHP KPQSTRKSSL SSAVSASNPA ANDMAEQSFT TQGSGQFDGV 300 ATPENSLISV GDDDFDRSSQ RSKSAGDDND DDEPEAKRRR DGDNNEGISA AGNRTVREPR 360 VVVQTTSDID ILDDGYRWRK YGQKVVKGNP NPRSYYKCTN PGCPVRKHVE RASHDLRAVI 420 TTYEGKHNHE VPPARGSGSH SLSRPFPSND LSATAIHPLA VTHRANNDAG GSNNKDNLLH 480 GLRLQQSSDN QTPFTLEMVQ NPNGFSFPEF GNSMGMGSYM NPTQSNDSLF VRAKEEPRDH 540 DMFIQSLLC

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MASSSGSLDT SANSHPSFTF STHPFMTTSY SDLLAAGSND LPSSAAAHGA HRGSGTGVPK  60
FKSLPPPSLP LLPPTLIPSS LFSIPPGLSP TELLDSPVLL SASYVLPSPT TGSFPSQSLN  120
WKNNSGYNQQ SIKEENKFLS EFSFLTQSSQ PPTSFQPAPT TEGKKQDGSM QSFSPEYGIV  180
QNQSQNNAGR DYPQQSQTVN RRSDDGYNWR KYGQKQVKGS ENPRSYYKCT FPNCPTKKKV  240
ERSLDGQITE IVYKGSHNHP KPQSTRKSSL SSAVSASNPA ANDMAEQSFT TQGSGQFDGV  300
ATPENSLISV GDDDFDRSSQ RSKSAGDDND DDEPEAKRRR DGDNNEGISA AGNRTVREPR  360
VVVQTTSDID ILDDGYRWRK YGQKVVKGNP NPRSYYKCTN PGCPVRKHVE RASHDLRAVI  420
TTYEGKHNHE VPPARGSGSH SLSRPFPSND LSATAIHPLA VTHRANNDAG GSNNKDNLLH  480
GLRLQQSSDN QTPFTLEMVQ NPNGFSFPEF GNSMGMGSYM NPTQSNDSLF VRAKEEPRDH  540
DMFIQSLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-109	WRKY family protein