PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523395.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 307aa    MW: 34480 Da    PI: 8.309
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.41.1e-52141391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeel+v+yL++kv+g++++l ++i +vd+yk++PwdLp+++  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk + + 
  XP_023523395.1  14 LPPGFRFYPTDEELLVQYLCRKVAGHHFSL-QIIGDVDLYKFNPWDLPSMAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVIST- 106
                     79***************************9.89***************7666799**********************************99999. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g+ vg+kk Lvfy g+apkg+kt+W+mheyrl
  XP_023523395.1 107 EGKRVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
                     9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGLHEKDPLS ELRLPPGFRF YPTDEELLVQ YLCRKVAGHH FSLQIIGDVD LYKFNPWDLP  60
SMAMFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVISTEGKR VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLI DASRKVGSIK LDDWVLCRIY KKNSSAQKPP TTIASIPSME  180
CSNGGSSSTC SSPHIDDVLE SLPEIEDRFF NLPRINSLQT LQHHQHLSSA NFDWATAAAA  240
SFEAIGELAP MTQSQSPAGF FNSNMYIPAT QPPRITAEQE VQSGLQRFQN FGWMPQNFPN  300
SGDGSGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-128NAC family protein