PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023523279.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 237aa MW: 27002.5 Da PI: 4.2977 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97 | 1.3e-30 | 68 | 125 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d+++++itY+++Hnh+ XP_023523279.1 68 DFWSWRKYGQKPIKGSPYPRGYYRCSTTkGCSAKKQVERCKTDGSMFIITYTSTHNHP 125 99***********************9988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MELSSVHSLS PKPNPDDDND TNLSTQLIPE ATSKKRKVLQ KTVVTVKIGS KKAAIGVGKM 60 KNEGPPPDFW SWRKYGQKPI KGSPYPRGYY RCSTTKGCSA KKQVERCKTD GSMFIITYTS 120 THNHPGPNIS TLNLDQTQEQ IQPQPLDQGQ NQDVHPNQGL EKQDQDQSDE EEEEELSMEE 180 EEEEEEEEEE EEEEEKANKT EVENHDHFFD ELEELPSPQP FSSYFFDEIR LISAAPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 34 | 61 | KKRKVLQKTVVTVKIGSKKAAIGVGKMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 5e-34 | WRKY family protein |