PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023523218.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 248aa MW: 27950.7 Da PI: 7.8306 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.4 | 5.9e-09 | 162 | 209 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L+ l+P + ++ + ++L +++ Y++sLq XP_023523218.1 162 SHSLAERVRREKINNKLKCLQNLVPGC----HETMGMTMVLDETITYVHSLQ 209 8*************************9....7888889***********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MIEFRQDLHH FKSSKASEER GLNMEVINQF PNMTESMLED FNQTDFSEEN FLGYHFQLSE 60 NTTRSSISDF PRLALFKCQS EFPVITRSSP LVDSSQETMN RKAEQVLVSF SGTPCAAFGN 120 NCSVARNLKN LGGRKRRKCE KEQEKPAEVV HIRAKRGEAT HSHSLAERVR REKINNKLKC 180 LQNLVPGCHE TMGMTMVLDE TITYVHSLQN QVEFLSMELA TACSTLGINS GMGATRKASH 240 NIAGDKIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 3e-37 | bHLH family protein |