PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023523215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 262aa MW: 29665.8 Da PI: 8.0794 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.3 | 6.5e-09 | 162 | 209 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L+ l+P + ++ + ++L +++ Y++sLq XP_023523215.1 162 SHSLAERVRREKINNKLKCLQNLVPGC----HETMGMTMVLDETITYVHSLQ 209 8*************************9....7888889***********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MIEFRQDLHH FKSSKASEER GLNMEVINQF PNMTESMLED FNQTDFSEEN FLGYHFQLSE 60 NTTRSSISDF PRLALFKCQS EFPVITRSSP LVDSSQETMN RKAEQVLVSF SGTPCAAFGN 120 NCSVARNLKN LGGRKRRKCE KEQEKPAEVV HIRAKRGEAT HSHSLAERVR REKINNKLKC 180 LQNLVPGCHE TMGMTMVLDE TITYVHSLQN QVEFLSMELA TACSTLGINS GMGATRKASV 240 IQQLPERVLT FDILLSNIKN KT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 4e-37 | bHLH family protein |