PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523138.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 342aa MW: 37390.4 Da PI: 6.1554

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.1	5.5e-30	163	216	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl XP_023523138.1 163 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 216 59*****************.******************************8 PP
2	Myb_DNA-binding	48.2	2.4e-15	165	215	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v+ lG + +ktI++ m+ +g+t++++ s++qky+ XP_023523138.1 165 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 215 789*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGEEVKMSEY ESGGGGGGSG GGGDDDENGA HEERVFEWET GLPDADDLTP LSQTLIPPEL 60 ASAFSISTGP SRTVMDLYRA SQNTLSNLRG FQSQAFSSNN FKSFNDDRTR DHDPMVFEGD 120 ETTERDAGSD SRKLRKVDCA EEADSALRTD NSMDDPSART LKRPRLVWTP QLHKRFVDVV 180 AHLGIKNAVP KTIMQLMNVE GLTRENVASH LQKYRLYLKR MQGSSNEGPS SPDRIFASTP 240 VPQSLHESSN SGHGNGNGHL PVPTPMPYGP PMMPMPVLGM AAPGHAHSYM GMPVAHPGSA 300 QGYHGFETHP YHMMHQRDWS GNKYGSIVPY PHPHVPPGTN DK

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGEEVKMSEY ESGGGGGGSG GGGDDDENGA HEERVFEWET GLPDADDLTP LSQTLIPPEL  60
ASAFSISTGP SRTVMDLYRA SQNTLSNLRG FQSQAFSSNN FKSFNDDRTR DHDPMVFEGD  120
ETTERDAGSD SRKLRKVDCA EEADSALRTD NSMDDPSART LKRPRLVWTP QLHKRFVDVV  180
AHLGIKNAVP KTIMQLMNVE GLTRENVASH LQKYRLYLKR MQGSSNEGPS SPDRIFASTP  240
VPQSLHESSN SGHGNGNGHL PVPTPMPYGP PMMPMPVLGM AAPGHAHSYM GMPVAHPGSA  300
QGYHGFETHP YHMMHQRDWS GNKYGSIVPY PHPHVPPGTN DK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.2	1e-78	G2-like family protein