PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522949.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 379aa MW: 42307.6 Da PI: 6.6148

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.2	6e-31	245	300	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p LH+rF++a+++LGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_023522949.1 245 KQRRCWSPGLHRRFIDALHRLGGSQVATPKQIKELMQVDGLTNDEVKSHLQKYRLH 300 79****************************************************97 PP
2	Myb_DNA-binding	40.1	8.2e-13	247	298	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++ ++ +++da ++lGg t+k I + m+ g+t ++ks++qky+ XP_023522949.1 247 RRCWSPGLHRRFIDALHRLGGSqvaTPKQIKELMQvDGLTNDEVKSHLQKYR 298 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MEPSLDLSLD SLPKTIPQIL LQLSSISDSF TKRTALDDYV KRLEDEMRKI DAFKRELPLC 60 VLLLQDAILK LKEEVLQLQS VKELPVIEEF MPLKGSSDQA DGENERRKWL SSAQLWNTNF 120 NFVDDDISNA KSNMNLDGDE DDRSVPQTQI EHWDCEKRRR AFELFKDQSN FVKRSKKEDM 180 AVSEVPKLTL MTTISDPFPV NVNLTVKNGR VGGRSGRAAV SGSSSPAVQI NGQTKLSQQQ 240 QTIRKQRRCW SPGLHRRFID ALHRLGGSQV ATPKQIKELM QVDGLTNDEV KSHLQKYRLH 300 VRKLAPQEGS SGEGWIPGEH EGEHHSKTSG TQAGSPDGPL QGGGSGKALS ITEGESMEGE 360 EDAKSDGHSW KGRIQKVGD

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MEPSLDLSLD SLPKTIPQIL LQLSSISDSF TKRTALDDYV KRLEDEMRKI DAFKRELPLC  60
VLLLQDAILK LKEEVLQLQS VKELPVIEEF MPLKGSSDQA DGENERRKWL SSAQLWNTNF  120
NFVDDDISNA KSNMNLDGDE DDRSVPQTQI EHWDCEKRRR AFELFKDQSN FVKRSKKEDM  180
AVSEVPKLTL MTTISDPFPV NVNLTVKNGR VGGRSGRAAV SGSSSPAVQI NGQTKLSQQQ  240
QTIRKQRRCW SPGLHRRFID ALHRLGGSQV ATPKQIKELM QVDGLTNDEV KSHLQKYRLH  300
VRKLAPQEGS SGEGWIPGEH EGEHHSKTSG TQAGSPDGPL QGGGSGKALS ITEGESMEGE  360
EDAKSDGHSW KGRIQKVGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-52	G2-like family protein