PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023522876.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 147aa MW: 16796.7 Da PI: 9.3572 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 69.6 | 3.8e-22 | 22 | 82 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++ ql++Le+ Fe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_023522876.1 22 RQRWTPSPVQLQILERIFEQgNGTPSKQKIKEITSELgqhgQISESNVYNWFQNRRARSKR 82 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 100.2 | 1.6e-32 | 21 | 84 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+p Q++iLe+++++G tP+k++i++it+eL ++G+i++ NV++WFQNr+aR+++kq XP_023522876.1 21 SRQRWTPSPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQ 84 789***********************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 147 aa Download sequence |
MRLGSVYYEP LMASSSHKIT SRQRWTPSPV QLQILERIFE QGNGTPSKQK IKEITSELGQ 60 HGQISESNVY NWFQNRRARS KRKQQGTAPA YGESELDTEV ESPKDKKTKP VDFQTPQTSA 120 PLGENMGFQS PEMHYELHFL DPNTNKA |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 76 | 84 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G35550.1 | 6e-50 | WOX family protein |