PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522850.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family G2-like
Protein Properties Length: 279aa    MW: 31876.8 Da    PI: 6.9314
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.22.1e-29211264154
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                     k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQ ++
  XP_023522850.1 211 KQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQVWK 264
                     79*************************************************886 PP
2Myb_DNA-binding40.46.6e-13213264148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ ++++a +qlGg    t+k I + m   g+t  ++ks++q ++
   XP_023522850.1 213 RRCWSPELHRRFLHALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQVWK 264
                      668*****************99***************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MIFSHKMQQI AFQMGFTLSD FALTLEQERR KVLMFQRELP LCLEIVTRAI DCCRHHVSET  60
TTENRLSECS EQTSSDVGPV LEEFIPINRY GVSDSEQQQQ QLQRQQQLPC ETQTENTDDS  120
DRNNLNLCPS DWLRSAQLWK DPSALNQDLP EKTAVVEVKS NGGAFRPFQK EKTGGGGTSS  180
TSAPAATSST AEMGSGGSNR REEKEAQNQR KQRRCWSPEL HRRFLHALQQ LGGSHVATPK  240
QIRELMKVDG LTNDEVKSHL QVWKSRIFFF PHFFFFLIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.12e-69G2-like family protein