PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522776.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 244aa    MW: 27326.1 Da    PI: 5.1167
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.65.6e-383492462
          zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +a +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rk+++++
  XP_023522776.1 34 TAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRTR 92
                    5679***************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MFSTAMSDHH QLPPPPPPPF ASHLERKWKP HLETAPNCPR CASANTKFCY YNNYSLSQPR  60
YFCKSCRRYW TKGGSLRNVP VGGGCRKSRR TRSSRSSTVS RSTNPNTCTQ ITESSSNGPD  120
IDLAAVFARY LNTAPPSTEA HALTSSPESV DPLENCEILF EGLSDLLIEE ENQAQEQKQG  180
IMGNYENTPF GLHAELGVEE EVWASQQIQE LDSFSCNYNA NQFCEVGDNW SSFDFAAVNN  240
VEYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.16e-43Dof family protein