PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023522600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 193aa MW: 22062.7 Da PI: 5.2804 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.6 | 8.8e-11 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT +E+ l+ +v ++G g W+tI + R+ ++k++w++ XP_023522600.1 5 KQKWTNQEEAALKAGVVKHGAGKWRTILKDPEfssvlYLRSNVDLKDKWRN 55 79***********************************88***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MGAPKQKWTN QEEAALKAGV VKHGAGKWRT ILKDPEFSSV LYLRSNVDLK DKWRNMSVMA 60 NGWGSREKAR LALKRLHAPK KDENILARSV AVQSEDELPE AKSVSLSSDI KLIAGPKRSN 120 VRKEEEEEEE EDDDEEEETE AERTERDARY DCHRWEKRLD NLIIEAITTL REPGGSNKTK 180 ITSYIEVVFL SPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 2e-61 | MYB_related family protein |