PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522361.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 330aa    MW: 35641.3 Da    PI: 10.1564
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.0003207229223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C++Cg+ F+ ++  + H  + H
  XP_023522361.1 207 TCHKCGEQFNKWDAAEAHHLSkH 229
                     7*****************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MPTVWLSLKK SLHCKSGPSE VHDPKTRRNL GAILTRKTGV GRSGCSRSIA NLKDVIHGGS  60
KRHLDKPPSC SPRSIGSSEF LNPITHEVIL TNSRCELKIT GFHGAFPPDV PSSADEPLTD  120
RPAASTFVGT LTPGTPGPGG HPTMHYFNPS FRSSSRKFPF REGFGSSNKS GGGGGARSLG  180
GGGGVHTSNR ISLETEIDGN RSSSAVTCHK CGEQFNKWDA AEAHHLSKHA VTELVEGDSS  240
RKIVEIICRT SWLKSENQSG RIERVLKVHN MQRTLARFEE HRETVKIKAS KLPKKHPRCL  300
ADGNELLRFY GTTVACSLGL NGSSSLCISE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.18e-64C2H2 family protein