PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023522322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WOX | ||||||||
Protein Properties | Length: 270aa MW: 30441.7 Da PI: 5.8001 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.9 | 5.3e-21 | 100 | 160 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps+++++e++ +l +++e++V++WFqNrRa+ k+ XP_023522322.1 100 RQRWTPTPVQLQILEQIFDEgNGTPSKQKIKEITLHLtqhgQISEANVYNWFQNRRARSKR 160 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 101.9 | 4.6e-33 | 99 | 162 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPtp Q++iLe+++++G tP+k++i++it +L+++G+i+++NV++WFQNr+aR+++kq XP_023522322.1 99 SRQRWTPTPVQLQILEQIFDEGNGTPSKQKIKEITLHLTQHGQISEANVYNWFQNRRARSKRKQ 162 689***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MEWANQQQQN NQTEQQLQVQ MQVEQLSNGD GVGGLYVKVM TDEQMELLRH QISVYASICE 60 QLVEMHKAIT AHQDLAGIRV GNLYCDQIMA SAAGHKISSR QRWTPTPVQL QILEQIFDEG 120 NGTPSKQKIK EITLHLTQHG QISEANVYNW FQNRRARSKR KQANSTPNNP DSEPDTEVDS 180 PKDKKTKPET FQTYDQFVSN SNNVYSQTSD LGAEMLAFDA QSNKGDPMLQ SFGSSHLSQV 240 ATAQNHRNND KMNVPDGYTP YHPCEGYPLG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 154 | 162 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 2e-67 | WOX family protein |