PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522264.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 244aa    MW: 26323.4 Da    PI: 10.0473
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522264.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.92.7e-061321701154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_023522264.1 132 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 170
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MNFPYNTHFG MNSNELMAAA SWSNSKVPPF LRNSPPKGAA PTPAQSQLQF SNNTAFWNAS  60
DMKDARASYI PASYNAAALA GDKSKSRSEG GKKSGNDQNQ QQTGGGAGGG GVGGAVKRPR  120
NETAPGLPAF KVRKEKMGDR ITALQQLVSP FGKTDTASVL SEAIEYIKFL HEQVSVLSTP  180
YLKSGGAVQQ QQQQKWCEKR KEGEGKEEDL RSRGLCLVPV SSTFPVTHET TVDFWTPSFG  240
GTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-54bHLH family protein