PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023522210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 202aa MW: 22548.4 Da PI: 9.515 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.3 | 4.6e-11 | 154 | 175 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+vk+s +pr XP_023522210.1 154 LDDGYKWRKYGQKVVKNSLHPR 175 59*******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 202 aa Download sequence |
MEGSQRSELP NYQLQVSFLS NAPNPQPIHE MGFLHFEDHN QVLSFLAPNN NAATPTTAPP 60 TTTTTTTTTT AMPSAFTTPP HAHLLTRPSW SNDQVGTLDP KPGGDENCTG STSDGTNSCA 120 RWRNSNADKT KVKVRRKLRE PRFCFQTRSD VDVLDDGYKW RKYGQKVVKN SLHPRYHLIS 180 ILLLIDTMIL STLNLSSKLK PL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 133 | 139 | KVRRKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44745.1 | 1e-29 | WRKY family protein |