PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522052.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 395aa    MW: 44506.4 Da    PI: 4.3946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.2e-194796255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_023522052.1 47 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 96
                    789******.7*********33....35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MARKRKTVEG VEEDKSSGEG GAMGWDEMVK EDAVAAELGG IRRARKRFVG VRQRPSGRWV  60
AEIKDTIQKI RVWLGTFDTA EEAARAYDEA ACLLRGSNTR TNFWPCSPLS ASSPALPSKI  120
TNLLIQRLNA RNKSINNNNL PNNHQEQKHQ PTQERILHTN EYRCREELAT TCLTDKVLSD  180
LLNDHEVFTT NNPNIEEISR SFESCLTEKD ESDGGDMESG NWLGMTQMSN SEGDEKSGIQ  240
QEEAEEESCV LDFHFLDDIG PPCYYSPFEI AEEIGEPMEA DGINEDDQPP SMMREAMKRM  300
KYERKISASL YAFNGINECL KLKLGKDGGN GRGRSSEMIA SLRKACDRKR SDEEKVEEEE  360
EEEEDCSPEM ESFSSSEVDL SIWSSLDLPP ICFVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-22ERF family protein