PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522047.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 402aa    MW: 43731.2 Da    PI: 6.8876
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.5e-052903281255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_023522047.1 290 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 328
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MESTANLHQL QDQLLVPPLP PSSSPSSSST IVPSFLDHGW TPNISLNNNN SCNYNTRVLN  60
GLSSSFPVRS DCGVKNTNSS MLLQDLGFQW NGVSSSGSFF SQFLHAGGKI KEEMLNSPST  120
NQDFHPFPST NHVKNNDSDL NDPSHKLFIK TLINGGDHTE PGEFFNKIYP SINVSDWNLS  180
SPPPPPPPPF SNSLDLNLQT PPDLFHSQDS FGIFKQTLSD FHDQIHPPPS AAILPCISSK  240
VTTPFSPELT EPKRPCTCIE PTLNQPSPPP PPLKKSRLDS RASCPPFKVR KEKLGDRIAA  300
LQQLVAPFGK TDTASVLMEA IGYIKFLQNQ VETLSVPYMK PSCNKTTGPT YRSPVEGGHE  360
GQLDRDLRSR GLCLVPLGCL SYVAGDGGGI WTPPGFNGGT SR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.11e-51bHLH family protein