PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023522031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 297aa MW: 32115 Da PI: 4.5364 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 271 | 294 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C++sF + L++H + H XP_023522031.1 271 FSCKSCDRSFGSDGALQSHSKAkH 294 89*****************88777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MEFWGVEVKP GQALVVKPGI QQYLHLSQAT LGETKKDKAN ENVTIFLKIG GQKLVLGILS 60 SEKFPQLSFD LVFEKEFELS HNGKGGSVYC AGYQAYAEDQ DPGDYFDSDS GSEDEELELP 120 LAQNGKATQK EKAIADKSNA AKALSLKKSD AKPSKPSKDE DDSEDDDDSD EDEDFDDESD 180 EEMLNADSSE SDDEDDDTES DEETPKKVEA TKKRPNESAS KTTPLPAKKA KLASPVKTDS 240 KKGGHTATPH PTKKNAKTPA KSETPKSGGQ FSCKSCDRSF GSDGALQSHS KAKHGGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03740.1 | 2e-30 | C2H2 family protein |