PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023521994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 581aa MW: 64726.1 Da PI: 5.1856 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 414.8 | 7.7e-127 | 211 | 580 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l+elL+ecA+a++++ +e ++l+a + +s +g+p+qRl ay++e+L ar +s+ ++y+al+++e + s++ l+++++++e++P+lkf++ XP_023521994.1 211 LKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPA---SDDLLSYMHMLYEICPYLKFGY 302 5799*****************************************************************9...99******************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 ++aN aI ea +e+r+HiiDf+i+qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+ + e le +++rLa++ ++ g+p+ef+ l d XP_023521994.1 303 MAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPGGAPHVRITGIDDPVSKyaRGEGLEVVERRLAEVSRKYGIPVEFHGL-PVFAPD 396 *******************************************************999999**************************6.777899 PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 ++ +L+++pgEalaVn+ lqlh+++desv+++++rd +L++vkslsP+vv++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr+s++ i XP_023521994.1 397 VTRGMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPRVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRNSKKGI 491 9********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 ++E+++l+++ivnv+aceg+er+e he ++kW+ rl++aGF + pls+++++ +++llr ++ + y++ e++g+++lgWk+r+L+s+SaW XP_023521994.1 492 NIEQHCLAKDIVNVIACEGREREECHELFGKWKTRLTMAGFCQFPLSSYVNSVIRSLLRCYS-EHYTLVEKDGAMLLGWKNRNLISASAW 580 **********************************************************9999.66************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 581 aa Download sequence |
MDSHQLFGFG VNSAGVSCTP YSSIPSLPNT LLRPLKFSVR NSPASSSIFS SYFELDSFLE 60 TTVSDNQDQR NSPENLSGLS PSCNSSFETN SFNQIALSNL NPGSNAFVYD GCSNENISYT 120 LKQLESVLMG PDNEEVVSKP DASFGDSSRP QIMGQRSYSW SQDRQGESSL VQLQTLPVSI 180 SQRSQAVHLG KRQKSMDESI LQQGGFPYDN LKELLIECAR ALAENRMEDF DNLVAIARGA 240 VSISGEPIQR LGAYMVEGLV ARKEESGANI YRALNCREPA SDDLLSYMHM LYEICPYLKF 300 GYMAANGAIA EACRNEDRIH IIDFQITQGT QWLTLLQALA ARPGGAPHVR ITGIDDPVSK 360 YARGEGLEVV ERRLAEVSRK YGIPVEFHGL PVFAPDVTRG MLDIRPGEAL AVNFPLQLHH 420 TPDESVDVNN PRDGLLRMVK SLSPRVVTLV EQESNTNTTP FFNRFVETLD YYLAIFESID 480 VTLPRNSKKG INIEQHCLAK DIVNVIACEG REREECHELF GKWKTRLTMA GFCQFPLSSY 540 VNSVIRSLLR CYSEHYTLVE KDGAMLLGWK NRNLISASAW Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 1e-159 | GRAS family protein |