PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521994.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 581aa    MW: 64726.1 Da    PI: 5.1856
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS414.87.7e-1272115801373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+elL+ecA+a++++ +e  ++l+a  +  +s +g+p+qRl ay++e+L ar  +s+ ++y+al+++e +   s++ l+++++++e++P+lkf++
  XP_023521994.1 211 LKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPA---SDDLLSYMHMLYEICPYLKFGY 302
                     5799*****************************************************************9...99******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+HiiDf+i+qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+  + e le +++rLa++ ++ g+p+ef+ l      d
  XP_023521994.1 303 MAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPGGAPHVRITGIDDPVSKyaRGEGLEVVERRLAEVSRKYGIPVEFHGL-PVFAPD 396
                     *******************************************************999999**************************6.777899 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++  +L+++pgEalaVn+ lqlh+++desv+++++rd +L++vkslsP+vv++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr+s++ i
  XP_023521994.1 397 VTRGMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPRVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRNSKKGI 491
                     9********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++E+++l+++ivnv+aceg+er+e he ++kW+ rl++aGF + pls+++++ +++llr ++ + y++ e++g+++lgWk+r+L+s+SaW
  XP_023521994.1 492 NIEQHCLAKDIVNVIACEGREREECHELFGKWKTRLTMAGFCQFPLSSYVNSVIRSLLRCYS-EHYTLVEKDGAMLLGWKNRNLISASAW 580
                     **********************************************************9999.66************************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    
MDSHQLFGFG VNSAGVSCTP YSSIPSLPNT LLRPLKFSVR NSPASSSIFS SYFELDSFLE  60
TTVSDNQDQR NSPENLSGLS PSCNSSFETN SFNQIALSNL NPGSNAFVYD GCSNENISYT  120
LKQLESVLMG PDNEEVVSKP DASFGDSSRP QIMGQRSYSW SQDRQGESSL VQLQTLPVSI  180
SQRSQAVHLG KRQKSMDESI LQQGGFPYDN LKELLIECAR ALAENRMEDF DNLVAIARGA  240
VSISGEPIQR LGAYMVEGLV ARKEESGANI YRALNCREPA SDDLLSYMHM LYEICPYLKF  300
GYMAANGAIA EACRNEDRIH IIDFQITQGT QWLTLLQALA ARPGGAPHVR ITGIDDPVSK  360
YARGEGLEVV ERRLAEVSRK YGIPVEFHGL PVFAPDVTRG MLDIRPGEAL AVNFPLQLHH  420
TPDESVDVNN PRDGLLRMVK SLSPRVVTLV EQESNTNTTP FFNRFVETLD YYLAIFESID  480
VTLPRNSKKG INIEQHCLAK DIVNVIACEG REREECHELF GKWKTRLTMA GFCQFPLSSY  540
VNSVIRSLLR CYSEHYTLVE KDGAMLLGWK NRNLISASAW Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-159GRAS family protein