PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521808.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 300aa    MW: 33898.6 Da    PI: 6.5111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.23e-13101152155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  XP_023521808.1 101 QRMTHIAVERNRRKQMNEYLSVLRSLMPES---YVQRGDQASIIGGAINFVKELE 152
                     79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MALEAVVFSQ DLYTSFGGGI WTNGSFQFPQ IPHDFPEKQT ENYPFEDWNS SSSVLLPIPS  60
PEEPAISRNP PLEAESRTPN PIRPRKRRPK SRKNKEDIEN QRMTHIAVER NRRKQMNEYL  120
SVLRSLMPES YVQRGDQASI IGGAINFVKE LEQQVQVLST METKTKGCSS SKPPFSEFFT  180
FPQFKSMEGC CSLGENETQC SSIADIEVTM VENHANLKIR SKRRPKQALK IVAGLHSLCL  240
SVLHLNISTI NQIVLYCLSV KGFGMDSLQV EDDCKLNSVD EIASALHQLL CRIEEESVMN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102113RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.16e-71bHLH family protein