PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023521549.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 333aa MW: 37455.2 Da PI: 9.3024 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 123.7 | 2.1e-38 | 99 | 211 | 3 | 124 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssasns 85 gkkdrhski+T++g+RdRRvRls+++a++fFdLqd+LG+dk+skt+eWL+ ++k+aikel +t s a XP_023521549.1 99 GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTkygnfevvggarRMSLA--------------- 178 89*************************************************************44444433322211111............... PP TCP 86 ssgkaaksaakskksqksaasalnlakesrakararare 124 ++ +++++ +++ + ++ lak+sraka+ ++r XP_023521549.1 179 ------SDVEEEEEMTNKVEVFNLLAKQSRAKAKDKKRV 211 ......111122222233333344444555555555443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MGSSSYNLNP FPYFPSSSTA SYNLPLSIPS LLNSEPSPTT FNFHQPHQDP VSFLAPYFPI 60 GHFSTSTTPE AVINFAVAGS NVQAFGNIPS APGARMGMGK KDRHSKIYTA QGLRDRRVRL 120 SIDIARKFFD LQDMLGYDKA SKTLEWLFSK SKKAIKELSR TKYGNFEVVG GARRMSLASD 180 VEEEEEMTNK VEVFNLLAKQ SRAKAKDKKR VDDENGDDDD GKIDIHGGET SNLSMEESSF 240 MNKRKLYAKK FIEDDEMKSC RDNDAEASQW KLLDQMKASK GYFQEPSMIK RKWKPSIISG 300 SSQRNLLISI DGIPINLTQN WEGNSNPNYP FPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67260.2 | 5e-30 | TCP family protein |