PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023521505.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 171aa MW: 18351.7 Da PI: 4.7484 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.7 | 9.2e-16 | 19 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r ++ g+Wv+eIr+p++ ++r++lg+f t+e+Aa a++ a+++l+g XP_023521505.1 19 LYRGIR-CR-GGKWVSEIREPRK---TTRIWLGTFPTPEMAATAYDVAALALRG 67 69***9.55.7*********843...5*************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 171 aa Download sequence |
MASLTSSSAS SSSTKKHPLY RGIRCRGGKW VSEIREPRKT TRIWLGTFPT PEMAATAYDV 60 AALALRGDQA ILNFPSSVAS YPVPVSTSPL DIRNAAAAAA ANALNKVETC RTNIEDSGNT 120 ASFVDEEEIF GMPSLLADMA EGMMVSPPRM NSPPLSDDNS DGAECLWNYF L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-33 | ERF family protein |