PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023521303.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | HSF | ||||||||
Protein Properties | Length: 158aa MW: 16618.4 Da PI: 4.2149 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 80.4 | 2.9e-25 | 86 | 144 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Flkk+ye++ed+e++ ++swse gnsf+v+d+++++ ++LpkyFkhsnf+SF+RQLn+Y XP_023521303.1 86 FLKKTYEMVEDPETDPVVSWSEGGNSFIVWDSHKLSITLLPKYFKHSNFSSFIRQLNTY 144 9*********************************************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 158 aa Download sequence |
MINQTTLSGG GGGGGGGGGC PDGAATASGD IMDQRSVKEE EMEVSTETMG GGGGESDCGG 60 GGDGGWASSA TAKPMEGLHE VGPAPFLKKT YEMVEDPETD PVVSWSEGGN SFIVWDSHKL 120 SITLLPKYFK HSNFSSFIRQ LNTYVSINQF NLFFLIYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G26150.1 | 2e-39 | HSF family protein |