PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521257.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 253aa    MW: 27316.2 Da    PI: 6.2346
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.0004694116123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_023521257.1  94 FSCNYCRRKFFSSQALGGHQNAH 116
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
METLDFNIEA AKDSEPSSSQ EANPDHSNTG TASSSCPPSS SKVTVAVADA VPISLDLTLQ  60
FNSNDIESKG DGDGENHGET NGNKSSSAST PRVFSCNYCR RKFFSSQALG GHQNAHKRER  120
TMAKRVTRMG MFFDRYGSLA SLPLHGSALR SLGIEAHGAL HQTVLASDHR PYPGRSVGAK  180
FEHSAFGFPT FVEEYEDDVG MFWPGSFRQV AAKVDSSLGP LKSTVQISDS EFGKTIPLPP  240
RTEESSPDLT LRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-34C2H2 family protein