PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023521088.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 461aa MW: 51514.4 Da PI: 6.6985

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023521088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.6	5.8e-28	214	267	2	56
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_023521088.1 214 LKVDWTPELHRKFVQAVEQL-GVNQAIPSRILELMKVEGLTRHNVASHLQKYRMH 267 5899**************.9*****************************96 PP
2	Myb_DNA-binding	44	5.2e-14	216	265	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023521088.1 216 VDWTPELHRKFVQAVEQLGVNqaIPSRILELMKvEGLTRHNVASHLQKYR 265 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MISNIHCLST MMKCIALGAI EFLQKPVSED KLRNIWQHVV HKAFNAGGSA VPSSLKPIKE 60 SVASILHLEL ENKENENQVP HELEISSGDN VDDHELLILP EGSDKYPAPS TPQQKHGMRL 120 VDQMNCLLEK ECGEQDGEES KSVETTCTAQ VENSQLSDKE VIKEEENSTD GCGAASNVDH 180 ELHDRDNICS SEKNKSKACG LGNPCRTKVS GKKLKVDWTP ELHRKFVQAV EQLGVNQAIP 240 SRILELMKVE GLTRHNVASH LQKYRMHKRH VLPKEEDGSW SSSKDPMRKN YYPHPQRHVM 300 AYPPPYHSNH VMPVAPIGSW GHMACPSPGV QMWAPPPGYP PWRPPDTWPW KSYLGVHGEA 360 WGCPVTPPPP HSPFSSNPHQ HISRFEYVDV HDKSYGIAPS PVDLQLADEE IDKVVKEAIS 420 KPWLPLPLGL KPPSTESVLS ELSRQQISTT PFHINGCKLL H

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MISNIHCLST MMKCIALGAI EFLQKPVSED KLRNIWQHVV HKAFNAGGSA VPSSLKPIKE  60
SVASILHLEL ENKENENQVP HELEISSGDN VDDHELLILP EGSDKYPAPS TPQQKHGMRL  120
VDQMNCLLEK ECGEQDGEES KSVETTCTAQ VENSQLSDKE VIKEEENSTD GCGAASNVDH  180
ELHDRDNICS SEKNKSKACG LGNPCRTKVS GKKLKVDWTP ELHRKFVQAV EQLGVNQAIP  240
SRILELMKVE GLTRHNVASH LQKYRMHKRH VLPKEEDGSW SSSKDPMRKN YYPHPQRHVM  300
AYPPPYHSNH VMPVAPIGSW GHMACPSPGV QMWAPPPGYP PWRPPDTWPW KSYLGVHGEA  360
WGCPVTPPPP HSPFSSNPHQ HISRFEYVDV HDKSYGIAPS PVDLQLADEE IDKVVKEAIS  420
KPWLPLPLGL KPPSTESVLS ELSRQQISTT PFHINGCKLL H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	3e-82	ARR-B family protein