PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520964.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 269aa    MW: 29716.6 Da    PI: 8.1261
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.91.4e-402687263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  XP_023520964.1 26 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSSS 87
                    7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDLPTAPHQQ IDTNSKEQAK KPRPQPEQAL KCPRCDSTNT KFCYYNNYSL SQPRYFCKSC  60
RRYWTQGGTL RNVPVGGGCR KNKRSSSSSS SSFAIAASSK KPQDHPFASP VPTLPHLAYD  120
HQANDLSLAF ARLHKTGTGT GTGPSSFNDF DFSVFNGFGY NSQPVYYDND DNNNNMGGGI  180
ERLHSYEHQY GNVTTTATAT TVTTTKQEVL GAGGGGEESR MLWGYPNWQM NNNSTDSNMM  240
GMDFDSGGVR ESWNNNVSSW HGLLNTPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.18e-43Dof family protein