PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520545.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 244aa    MW: 27156.5 Da    PI: 7.7619
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.82.7e-393999262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    ke+al+cprC+s+ntkfCyynnysl+qPryfCk+C+ryWt+GG+lrn+PvGgg+rknk+ s
  XP_023520545.1 39 KEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCKRYWTEGGSLRNIPVGGGSRKNKRPS 99
                    7899******************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDTSQWPQEI LMKPIEEIVA NTYPKQGVSS LERKIRPQKE QALNCPRCNS SNTKFCYYNN  60
YSLTQPRYFC KTCKRYWTEG GSLRNIPVGG GSRKNKRPSS QNKILDLPQN PNSVSSETVV  120
VGRNPSTIDV TTNHLSAMEL LTGMTTKNSR DLNCFLPMPS IVPDPRSVYT TGFPDLHEPF  180
KPSLGFSLDG YGVVPTEVDN GDGRTMQLPL FEDLKQGESN GVEQGKEQGD SNGYWSGMLS  240
GGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.13e-56Dof family protein