PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520256.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 274aa    MW: 29701.8 Da    PI: 5.1851
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.24.7e-3073131259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+ver++ dp+++ itY+ eHnh+
  XP_023520256.1  73 SDSWAWRKYGQKPIKGSPYPRAYYRCSSSkGCPARKQVERNRLDPTMLLITYSCEHNHS 131
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MDDVTFNNNH QFYSVDLLED SDGFKAAPAS PPPPNSTAAA AKKGRRGMKK KVVSVRINGD  60
GPRNSSGSTT PPSDSWAWRK YGQKPIKGSP YPRAYYRCSS SKGCPARKQV ERNRLDPTML  120
LITYSCEHNH SGPVSRNNNH NQAAAIAAVK PTSPETVPVH PEPEPEPEAE EKFVESLEDQ  180
FSWFGEMETT SSTVLETSIF SGRSSSGVGD SISSDVAMPF PMGDDDVDDS LFADLGELPE  240
CSVVFRHGGG PGLPVDEQPP TTQRRITPWC GATT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.14e-57WRKY family protein