PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520229.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 307aa    MW: 34143.3 Da    PI: 4.3203
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.71.7e-07184228655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      ++ r RR++i  + +eL el+P        K++ ae+L  A +Y+k Lq
  XP_023520229.1 184 TIAARERRRKITAKTQELGELVPGG-----SKMNTAEMLSSAFKYVKFLQ 228
                     56789******************95.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MAALSFYSNF SSDPSSYHHQ FHPFSPEISP ELFHLPPPQL LPDPAFDYLP AAVDHSVFFP  60
TATAPFFDDV SPFVFSDVYP YFPTPAVDSF VPVSAEFFPC DEFEFYCPKR QRVVMEQSFC  120
YGGGGGNVGG DGGYFPLPEF FSDQWDGRLG NAEMMNKGDC LKGTLTPAPL PSPSPSSNNL  180
SAQTIAARER RRKITAKTQE LGELVPGGSK MNTAEMLSSA FKYVKFLQAQ VAILQVKQET  240
EQEQEQEQTE TEDLQILEST MIQEKLYAEE KCLVPKGFVQ NLVNSPEIQS NPSILNSINQ  300
ILRTNSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.16e-27bHLH family protein