PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023520109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 569aa MW: 61212.8 Da PI: 8.461 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.8 | 6.1e-30 | 227 | 286 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_023520109.1 227 MNDGCQWRKYGQKIAKGNPCPRAYYRCTGSpTCPVRKQVQRCADDMSILITTYEGNHNHP 286 58**************************888****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 569 aa Download sequence |
MEAAAPAFGR PRPVVKPEKP AGDSDDDRNS PSNQPLLIKE EQLESARTEM GEVREENQRL 60 KMSLGQIMKD YEALKMQFLG IVGREAKKLP EHDKEQRQRP HDDQTEETEL VSLTLGRYPM 120 AEKKKAAEEK NINGGDKEAV VKQALSLGLN CKFEQESTPA TVKEANSPNR SLTNSIDHET 180 KEDAGETNWP PSKGLKTMRS VDDDSLPTNP PKRARVCVRA RCETTTMNDG CQWRKYGQKI 240 AKGNPCPRAY YRCTGSPTCP VRKQVQRCAD DMSILITTYE GNHNHPLPAS ATAMASTTSA 300 AASMLLSGSS TSSAPNTTAA ASSSSSSSNH ALSFYSNSKQ NFYIPNNSSI ISSTSPTHPT 360 ITLDLTSNPS STSNPSTHFG KFPSSFPNSR YPFTSQLDFG SSRNNVLSWN NGVLSYNRNN 420 HPTTTPTNNI YQNYIQHQRN TAMSLPHQQP PLPDTIAAAT KAITADPSFQ SALAAALTSI 480 IGSGGTSAGT VKSSARGEQP LFQLTSTATT TTNKGNGCGT SFLSNITTSA TPSNSPPTGN 540 MAFVPASSLP FSNPKSASAS PGDHIDLTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 1e-57 | WRKY family protein |