PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520109.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 569aa    MW: 61212.8 Da    PI: 8.461
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86.1e-30227286159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  XP_023520109.1 227 MNDGCQWRKYGQKIAKGNPCPRAYYRCTGSpTCPVRKQVQRCADDMSILITTYEGNHNHP 286
                     58**************************888****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 569 aa     Download sequence    
MEAAAPAFGR PRPVVKPEKP AGDSDDDRNS PSNQPLLIKE EQLESARTEM GEVREENQRL  60
KMSLGQIMKD YEALKMQFLG IVGREAKKLP EHDKEQRQRP HDDQTEETEL VSLTLGRYPM  120
AEKKKAAEEK NINGGDKEAV VKQALSLGLN CKFEQESTPA TVKEANSPNR SLTNSIDHET  180
KEDAGETNWP PSKGLKTMRS VDDDSLPTNP PKRARVCVRA RCETTTMNDG CQWRKYGQKI  240
AKGNPCPRAY YRCTGSPTCP VRKQVQRCAD DMSILITTYE GNHNHPLPAS ATAMASTTSA  300
AASMLLSGSS TSSAPNTTAA ASSSSSSSNH ALSFYSNSKQ NFYIPNNSSI ISSTSPTHPT  360
ITLDLTSNPS STSNPSTHFG KFPSSFPNSR YPFTSQLDFG SSRNNVLSWN NGVLSYNRNN  420
HPTTTPTNNI YQNYIQHQRN TAMSLPHQQP PLPDTIAAAT KAITADPSFQ SALAAALTSI  480
IGSGGTSAGT VKSSARGEQP LFQLTSTATT TTNKGNGCGT SFLSNITTSA TPSNSPPTGN  540
MAFVPASSLP FSNPKSASAS PGDHIDLTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-57WRKY family protein