PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520108.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 600aa    MW: 64755.5 Da    PI: 7.9445
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.76.5e-30258317159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  XP_023520108.1 258 MNDGCQWRKYGQKIAKGNPCPRAYYRCTGSpTCPVRKQVQRCADDMSILITTYEGNHNHP 317
                     58**************************888****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    
MEAAAPAFGR PRPVVKPEKP AGDSDDDRNS PSNQPLLIKK ENQGKEEHES EDKTSHSSNQ  60
KDDLSCTKIQ EEQLESARTE MGEVREENQR LKMSLGQIMK DYEALKMQFL GIVGREAKKL  120
PEHDKEQRQR PHDDQTEETE LVSLTLGRYP MAEKKKAAEE KNINGGDKEA VVKQALSLGL  180
NCKFEQESTP ATVKEANSPN RSLTNSIDHE TKEDAGETNW PPSKGLKTMR SVDDDSLPTN  240
PPKRARVCVR ARCETTTMND GCQWRKYGQK IAKGNPCPRA YYRCTGSPTC PVRKQVQRCA  300
DDMSILITTY EGNHNHPLPA SATAMASTTS AAASMLLSGS STSSAPNTTA AASSSSSSSN  360
HALSFYSNSK QNFYIPNNSS IISSTSPTHP TITLDLTSNP SSTSNPSTHF GKFPSSFPNS  420
RYPFTSQLDF GSSRNNVLSW NNGVLSYNRN NHPTTTPTNN IYQNYIQHQR NTAMSLPHQQ  480
PPLPDTIAAA TKAITADPSF QSALAAALTS IIGSGGTSAG TVKSSARGEQ PLFQLTSTAT  540
TTTNKGNGCG TSFLSNITTS ATPSNSPPTG NMAFVPASSL PFSNPKSASA SPGDHIDLTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-57WRKY family protein