PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520103.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family TCP
Protein Properties Length: 307aa    MW: 35031.5 Da    PI: 9.1286
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.23e-38862253131
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....seceaesssssasnsssg..... 88 
                      kkdrhski T++g+RdRR+Rls+++a++fF Lqd LG+dk skt+eWLl+qa p+i +l+++ + s+    + c++++ss+++     +     
  XP_023520103.1  86 SKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHiittTVCSNSNSSEADM---VSgidev 177
                     69*************************************************************5555522223332222222222...2244467 PP

             TCP  89 .......kaaksaakskksqksaasalnlakesrakarararertrekmr 131
                            k+++s   ++k++k++     + ke r+kar+rar rt ek++
  XP_023520103.1 178 ggggggpKKMNSCSLKRKRDKQPR--KPMCKELRQKARERARARTMEKKN 225
                     777876655555544444444444..79999****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MFFSTKNDDD HDHDHDHSFH LPISFFPFPS PFEVDEQYDD QLHNFTTNPQ KNFTIPSPDN  60
IVASNKKMGI GNSDQKKLKI PRKRLSKKDR HSKITTARGL RDRRMRLSLP VARQFFGLQD  120
LLGVDKGSKT VEWLLTQASP EILKLAKQRN CSHIITTTVC SNSNSSEADM VSGIDEVGGG  180
GGGPKKMNSC SLKRKRDKQP RKPMCKELRQ KARERARART MEKKNQIFKD CSDHHHPNHN  240
KISSCSWSSP FETCGEESGG THSYNFNPSM EVENLCSFEI MTKWSPSISS LNFLQPQHEF  300
EDTQMFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192199LKRKRDKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.12e-31TCP family protein