PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023520059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 385aa MW: 44067.8 Da PI: 8.6375 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.8 | 4.4e-06 | 57 | 79 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_023520059.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP | |||||||
2 | zf-C2H2 | 16.3 | 2.8e-05 | 136 | 158 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_023520059.1 136 WVCEKCSKGYAVQSDYKAHLKTC 158 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence |
MLADLSSPSL PCFEPLPNCF ESNGTNTKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRTE PTTAVRKRVF VCPEPSCLHH NPTHALGDLV 120 GIKKHFRRKH SNHKQWVCEK CSKGYAVQSD YKAHLKTCGT RGHSCDCGRV FSRVESFIEH 180 QDSCKLGHHH QQSEQKLPCL SRTASSPTPS PSSDTNFSFF NKNHTIIPQR IITHHPQNLE 240 LQLSNNSTSI HVSVSPKRRE NYSTHLQLSI GSCNYDEKND DGDDDHDEKT RNGLEFLKVK 300 EEAKEQMRVA MEEKAIAEEA RNEAKKQIEI AEKELANAKR MRQEAQGELQ RALALKEHAM 360 KQINSTILQI TCQVCRQHFE PFPTI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 28 | 33 | KRKRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68130.1 | 1e-122 | C2H2 family protein |