PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023519613.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 319aa    MW: 35720.1 Da    PI: 4.7629
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023519613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.67.1e-062112481254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_023519613.1 211 RKEKLGDKITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 248
                     67788899********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDDEFPPGIC GRKLWDTTKI TFPPAAATPS PCSVSDSTFL IDPTVRTPSN WNQNFLGDDG  60
QRVDTTLMVD YDHQETNASE EPQNPSIFNA DHDSMFLMGQ THSNFYDNIV TTTSQGLPMA  120
YPFGMISNGY TPTLLPSSLD QPKQFLVNNR TISNSCRPMF ETLNFTTKLI SCEEVVRDSS  180
RVETKNKSNE ITTIKRARND MPSSLPTFKV RKEKLGDKIT ALQQLVSPFG KTDTASVLHE  240
AIEYIKFLHD QVRVLSTPYM EMGEQEHDGV QLVKEELEEN KKQDLTSRGL CLVPIPSSVA  300
LANGNTLDFW SPTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.33e-46bHLH family protein