PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023519461.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 407aa MW: 44420.9 Da PI: 8.2074

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023519461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.3e-39	103	163	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG +rnvPvG+grrk+k+s XP_023519461.1 103 PDKLLPCPRCKSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSA 163 78999****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MLDCKDPAIK LFGRNIPLSD DVEAPAVHSH DFSSEKHAEP RKDASVDDLE KPVDGSDDSR 60 NLEGGQEGSV NPKTPSIDEE TARPINGEPE SERLYSEKTL KKPDKLLPCP RCKSMDTKFC 120 YYNNYNVNQP RHFCKACQRY WTAGGIMRNV PVGAGRRKSK NSASYYRHIT ISEALEAAEI 180 EASNGTHKPK FIGNCGRVLS FNLDAPSSIP KGCDKSWSLS SMAVQTPSEL KTNGFPSQIS 240 CLSGVPCPLV WNSSVSPPPF GPPGFPFSFL PPTTWSCGVP GPWNTPWFSP QDSTAQKSKA 300 SPTLGKHQRD NEMAKEDAIS SKEEGVKQRN GGVLTPKTLR IDDPSEAAKS SIWATLGIKN 360 ESMSGGRNLF KTFEPKGHEK VPVSKNASVL QANPAALSRS LVFHESS

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MLDCKDPAIK LFGRNIPLSD DVEAPAVHSH DFSSEKHAEP RKDASVDDLE KPVDGSDDSR  60
NLEGGQEGSV NPKTPSIDEE TARPINGEPE SERLYSEKTL KKPDKLLPCP RCKSMDTKFC  120
YYNNYNVNQP RHFCKACQRY WTAGGIMRNV PVGAGRRKSK NSASYYRHIT ISEALEAAEI  180
EASNGTHKPK FIGNCGRVLS FNLDAPSSIP KGCDKSWSLS SMAVQTPSEL KTNGFPSQIS  240
CLSGVPCPLV WNSSVSPPPF GPPGFPFSFL PPTTWSCGVP GPWNTPWFSP QDSTAQKSKA  300
SPTLGKHQRD NEMAKEDAIS SKEEGVKQRN GGVLTPKTLR IDDPSEAAKS SIWATLGIKN  360
ESMSGGRNLF KTFEPKGHEK VPVSKNASVL QANPAALSRS LVFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62430.1	2e-70	Dof family protein