PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023519250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HSF | ||||||||
Protein Properties | Length: 411aa MW: 46602.2 Da PI: 5.1007 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 107.9 | 7.5e-34 | 15 | 106 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d+++++++sws++ +sfvv+++ ef++ +Lpk+Fkhsnf+SF+RQLn+YgFkkv+ ++ weF+++ F +g+++l+++ XP_023519250.1 15 FLVKTYDMVDDPSTNSIVSWSSSDKSFVVWKPLEFSSVLLPKFFKHSNFSSFIRQLNTYGFKKVDPDQ---------WEFANDDFVRGEQHLMKN 100 9********************999*****************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_023519250.1 101 IHRRKP 106 ***985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence |
MDEAQGSGLT SLPPFLVKTY DMVDDPSTNS IVSWSSSDKS FVVWKPLEFS SVLLPKFFKH 60 SNFSSFIRQL NTYGFKKVDP DQWEFANDDF VRGEQHLMKN IHRRKPVHSH SLQNPHGQGV 120 SPPLTEVERK SFEDNIETLK RDKEQLVLEL RKHKQEYQGV VLQMQNLKDR FQCVQQGMQL 180 FISLIARFLH KPGLRLDLLP QLETSDRKRR LPRVSYNNSE DNLEDNQMGT TQTISRENMD 240 CSFDPILKEE QFELLETSIA FWEGIIHSYG QTISPLDSSS NLELGGSVSH ASSPAVTCRQ 300 VSEELRCKSP GIDMNLEPMA TVAPESVASK DQAAGVKAPV PTGVNDVFWQ QFLTENPGSS 360 DPQEVQSARK DSDVIIEENR PSDQGNFWWN TRSVNNVVEQ IGNLAPAEKF S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 206 | 211 | DRKRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18880.1 | 1e-108 | HSF family protein |