PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023519250.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 411aa    MW: 46602.2 Da    PI: 5.1007
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023519250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind107.97.5e-34151062102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y++++d+++++++sws++ +sfvv+++ ef++ +Lpk+Fkhsnf+SF+RQLn+YgFkkv+ ++         weF+++ F +g+++l+++
  XP_023519250.1  15 FLVKTYDMVDDPSTNSIVSWSSSDKSFVVWKPLEFSSVLLPKFFKHSNFSSFIRQLNTYGFKKVDPDQ---------WEFANDDFVRGEQHLMKN 100
                     9********************999*****************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_023519250.1 101 IHRRKP 106
                     ***985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MDEAQGSGLT SLPPFLVKTY DMVDDPSTNS IVSWSSSDKS FVVWKPLEFS SVLLPKFFKH  60
SNFSSFIRQL NTYGFKKVDP DQWEFANDDF VRGEQHLMKN IHRRKPVHSH SLQNPHGQGV  120
SPPLTEVERK SFEDNIETLK RDKEQLVLEL RKHKQEYQGV VLQMQNLKDR FQCVQQGMQL  180
FISLIARFLH KPGLRLDLLP QLETSDRKRR LPRVSYNNSE DNLEDNQMGT TQTISRENMD  240
CSFDPILKEE QFELLETSIA FWEGIIHSYG QTISPLDSSS NLELGGSVSH ASSPAVTCRQ  300
VSEELRCKSP GIDMNLEPMA TVAPESVASK DQAAGVKAPV PTGVNDVFWQ QFLTENPGSS  360
DPQEVQSARK DSDVIIEENR PSDQGNFWWN TRSVNNVVEQ IGNLAPAEKF S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1206211DRKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18880.11e-108HSF family protein