PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023519131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 381aa MW: 42572.6 Da PI: 8.8356 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 73.1 | 2.9e-23 | 23 | 88 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_023519131.1 23 RKQKSLGLLCSNFLSLYNHDGVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 77.3 | 1.5e-24 | 155 | 235 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ ++++l+e+ak L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g XP_023519131.1 155 RREKSLALLTQNFVKLFICSHVNMISLDEAAKLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthtadTRKPAFRWLG 235 689**************************************999**************************99*******87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 381 aa Download sequence |
MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER 60 RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDCNDYAKVS 120 DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KADNRREKSL ALLTQNFVKL FICSHVNMIS 180 LDEAAKLLLG DGHNSSIMRT KVRRLYDIAN VLSSMNLIEK THTADTRKPA FRWLGVRGKV 240 KSEPTVLPES RKRAFGTDVT NVSYKKTKAE SSAYQGLNHC LNVQKLVQCE NSSQEDSQNS 300 QDQECERTSK SYQFGPFSPV TVAKVSVSDN NNVKRTHDWE SLSSTFRPQY HNQALKELFS 360 HYVEAWKSWY SEAVKKPIQI S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-129 | E2F/DP family protein |