PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023519128.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 405aa MW: 45392 Da PI: 8.6807

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023519128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73	3.2e-23	23	88	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_023519128.1 23 RKQKSLGLLCSNFLSLYNHDGVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88 79***************999********.....****************************98 PP
2	E2F_TDP	77.1	1.6e-24	155	235	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ ++++l+e+ak L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g XP_023519128.1 155 RREKSLALLTQNFVKLFICSHVNMISLDEAAKLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthtadTRKPAFRWLG 235 689************************************999**********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER 60 RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDCNDYAKVS 120 DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KADNRREKSL ALLTQNFVKL FICSHVNMIS 180 LDEAAKLLLG DGHNSSIMRT KVRRLYDIAN VLSSMNLIEK THTADTRKPA FRWLGVRGKV 240 KSEPTVLPES RKRAFGTDVT NVSYKKTKAE SSAYQGLNHC LNVQKLVQCE NSSQEDSQNS 300 QDQECERTSK SYQFGPFSPV TVAKVSVSDN NNVKRTHDWE SLSSTFRPQY HNQALPPVYN 360 FQLFFSTLLM FDIVTFIALK ELFSHYVEAW KSWYSEAVKK PIQIS

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDCNDYAKVS  120
DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KADNRREKSL ALLTQNFVKL FICSHVNMIS  180
LDEAAKLLLG DGHNSSIMRT KVRRLYDIAN VLSSMNLIEK THTADTRKPA FRWLGVRGKV  240
KSEPTVLPES RKRAFGTDVT NVSYKKTKAE SSAYQGLNHC LNVQKLVQCE NSSQEDSQNS  300
QDQECERTSK SYQFGPFSPV TVAKVSVSDN NNVKRTHDWE SLSSTFRPQY HNQALPPVYN  360
FQLFFSTLLM FDIVTFIALK ELFSHYVEAW KSWYSEAVKK PIQIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-123	E2F/DP family protein