PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023519127.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 408aa MW: 45649.3 Da PI: 8.6807

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023519127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73	3.3e-23	23	88	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_023519127.1 23 RKQKSLGLLCSNFLSLYNHDGVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88 79***************999********.....****************************98 PP
2	E2F_TDP	77.1	1.7e-24	158	238	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ ++++l+e+ak L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g XP_023519127.1 158 RREKSLALLTQNFVKLFICSHVNMISLDEAAKLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthtadTRKPAFRWLG 238 689************************************999**********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER 60 RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDCNDYAKVS 120 DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KAVSADNRRE KSLALLTQNF VKLFICSHVN 180 MISLDEAAKL LLGDGHNSSI MRTKVRRLYD IANVLSSMNL IEKTHTADTR KPAFRWLGVR 240 GKVKSEPTVL PESRKRAFGT DVTNVSYKKT KAESSAYQGL NHCLNVQKLV QCENSSQEDS 300 QNSQDQECER TSKSYQFGPF SPVTVAKVSV SDNNNVKRTH DWESLSSTFR PQYHNQALPP 360 VYNFQLFFST LLMFDIVTFI ALKELFSHYV EAWKSWYSEA VKKPIQIS

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDCNDYAKVS  120
DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KAVSADNRRE KSLALLTQNF VKLFICSHVN  180
MISLDEAAKL LLGDGHNSSI MRTKVRRLYD IANVLSSMNL IEKTHTADTR KPAFRWLGVR  240
GKVKSEPTVL PESRKRAFGT DVTNVSYKKT KAESSAYQGL NHCLNVQKLV QCENSSQEDS  300
QNSQDQECER TSKSYQFGPF SPVTVAKVSV SDNNNVKRTH DWESLSSTFR PQYHNQALPP  360
VYNFQLFFST LLMFDIVTFI ALKELFSHYV EAWKSWYSEA VKKPIQIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-122	E2F/DP family protein