PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518844.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 296aa MW: 33938.2 Da PI: 10.2798

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.5e-32	103	156	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ XP_023518844.1 103 PRLRWTPELHLNFVNAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 156 8****************************************************7 PP
2	Myb_DNA-binding	54	4e-17	104	155	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_023518844.1 104 RLRWTPELHLNFVNAVERLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 155 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MYCSNLLLNF RDRRKRDGTD ERRASRAEEK FNPLSSRKCS LIDLNEEARV EVEDGDHDAN 60 VVVEQNEERK KYGSTSIQNA NNSSREQNAR RTTVRQYVRS KVPRLRWTPE LHLNFVNAVE 120 RLGGQERATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKLD QTGQVIGEAC NGVMHGHGGY 180 FNSSNNGIMS LLLQQPTRHS CCHPVLTRHL HSHFGTGRTT LFAPYHGRPY SQVLEQKSRW 240 SSLGERAWKM RRMNDPTASH GKIRELREAW EPELQLGLSH TKSNSNKEIT TELSLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-42	G2-like family protein