PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518797.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 377aa MW: 42045.2 Da PI: 6.3862

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.8	2.2e-32	243	298	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a+++LGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_023518797.1 243 KQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 298 79****************************************************97 PP
2	Myb_DNA-binding	45.9	1.3e-14	245	296	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda ++lGg t+k I + m+ g+t ++ks++qky+ XP_023518797.1 245 RRCWSPELHRRFVDALHRLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 296 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MELSLDLSLD FVPKTIPEIL LELSSISDSF TKQSKLDDYV KRLEDEMRKI DAFKRELPLC 60 VLLLQDAILR LKEEVLQFQS LKDQPVIEKF IPLKGSSEEA DGESEEREKK RWLSSTQLWN 120 TNFNFDDDIP NPKSNMNLNG DEDDRSVPQT PIEHWDCAKR RRAFELFKDQ NNFVKGATKE 180 DVAFSEVPKL TLMTPISDPF SGNLTLKNGT ARGSSASVPG LSSPAAQITG HAKLSQHQQT 240 IRKQRRCWSP ELHRRFVDAL HRLGGSQVAT PKQIRELMQV DGLTNDEVKS HLQKYRLHVR 300 KLGPTEGSGG GGWMAEAHQG DHHSKTSATH AGSPDGPLQG GGSGKALSIT EGESMEGEED 360 AKSEGHSWKG RIQKVGD

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MELSLDLSLD FVPKTIPEIL LELSSISDSF TKQSKLDDYV KRLEDEMRKI DAFKRELPLC  60
VLLLQDAILR LKEEVLQFQS LKDQPVIEKF IPLKGSSEEA DGESEEREKK RWLSSTQLWN  120
TNFNFDDDIP NPKSNMNLNG DEDDRSVPQT PIEHWDCAKR RRAFELFKDQ NNFVKGATKE  180
DVAFSEVPKL TLMTPISDPF SGNLTLKNGT ARGSSASVPG LSSPAAQITG HAKLSQHQQT  240
IRKQRRCWSP ELHRRFVDAL HRLGGSQVAT PKQIRELMQV DGLTNDEVKS HLQKYRLHVR  300
KLGPTEGSGG GGWMAEAHQG DHHSKTSATH AGSPDGPLQG GGSGKALSIT EGESMEGEED  360
AKSEGHSWKG RIQKVGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	5e-53	G2-like family protein