PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023518785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 193aa MW: 21939.5 Da PI: 8.4754 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.9 | 1.2e-29 | 99 | 156 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYG+K++k++++pr+YY+C+s+gC vkk+ver++ed ++v++tYeg H he XP_023518785.1 99 QDGFKWRKYGKKSIKNNPNPRNYYKCSSSGCGVKKRVERDREDSSYVITTYEGIHSHE 156 8********************************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 193 aa Download sequence |
MNSLQNPTQF EDSSSSFMDL LDFSGYLLPD FWLEPETTAF PEAIIGGRTR SMEEATSTMD 60 KNSIDEWRER RGVKRKQKGR GGGCHKVAFR TKSELEILQD GFKWRKYGKK SIKNNPNPRN 120 YYKCSSSGCG VKKRVERDRE DSSYVITTYE GIHSHESPFS KCCNDPIFHS HGSCPNSTYL 180 HLSSPPCSST TTL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 70 | 76 | RRGVKRK |
2 | 70 | 77 | RRGVKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64810.1 | 1e-38 | WRKY family protein |