PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518686.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 330aa MW: 36810.4 Da PI: 5.7566

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.5	8.4e-12	150	196	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L l+P + K +Ka+iL Av+Y+k+Lq XP_023518686.1 150 EHVLAERKRREKLSQRFIALSALIPGL-----NKIDKASILGGAVRYVKELQ 196 5999********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MEISSTKWVS EWEMEDAPYF MDEFQVNPFE FSFDEMKFEE NGRSDFYGST DLPSAVKVEG 60 KGATSQGFAP KADSSSSSSH IISFDKLNCK AGKGCDVKGS VEPKIEMAYE SDGNLNFSTL 120 ITESWNNEYS RQGAKKAAGS VNRNPFHARE HVLAERKRRE KLSQRFIALS ALIPGLNKID 180 KASILGGAVR YVKELQERLK VVEEQAAISK VSEEQSTVYV KRRSPASSSD DDDTISSEEN 240 SFSGRPVPEI EARVSNKDVL IRIHCHKRKG CLSYLLGKIE NLNLTILNSS ALPFAHSKLD 300 ITIVAQVDDG FCMKVEDVVK NLRQALLDFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	160	ERKRRE
2	156	161	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	8e-52	bHLH family protein