PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518575.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 473aa MW: 52556.1 Da PI: 5.2476

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.1	9.8e-26	146	211	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn i wkg XP_023518575.1 146 RHDSSLGLLTKKFINLIKQARDGILDLNKAAETL---KV--QKRRIYDITNVLEGIGLIEKKLKNIICWKG 211 6799****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MRGGGSRAPN RSEPLPHTQP AQILPPLKRQ LAFELSRPPF VPPGDYYHFG GGSSNALDQQ 60 PDAIVVKPLK PKQKGAMYNH VVESSDCIHD QSSSKDALSF VQTPVSAKGG RVYNKAKTPR 120 RATSGPGTPI SDTSTYSPLT PAGNCRHDSS LGLLTKKFIN LIKQARDGIL DLNKAAETLK 180 VQKRRIYDIT NVLEGIGLIE KKLKNIICWK GFNAQSPGNV DSDTAMLQVD VENLSFEERR 240 LEDKISALQE RLRNLSEDEN IQKWLFVTEE DIKGLPCFQN ETLIAIKAPH GTTLEVPDPD 300 EAVDDPQRRY RIVLRSTMGP IDVYLVSQFE EKIEEMNVVQ TPSSFLHASS SGSNEHLTTE 360 AIIGESSRNE IEPQAQLSQY SSICDVHGSN EFPGGMMKIM PSEIDNDADY WLLSDAEVSI 420 TDMWRTDTDI VWDQSDMVPH DFIISDVSAQ RPRPVSPHSE RGGVPSDVNL RQR

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MRGGGSRAPN RSEPLPHTQP AQILPPLKRQ LAFELSRPPF VPPGDYYHFG GGSSNALDQQ  60
PDAIVVKPLK PKQKGAMYNH VVESSDCIHD QSSSKDALSF VQTPVSAKGG RVYNKAKTPR  120
RATSGPGTPI SDTSTYSPLT PAGNCRHDSS LGLLTKKFIN LIKQARDGIL DLNKAAETLK  180
VQKRRIYDIT NVLEGIGLIE KKLKNIICWK GFNAQSPGNV DSDTAMLQVD VENLSFEERR  240
LEDKISALQE RLRNLSEDEN IQKWLFVTEE DIKGLPCFQN ETLIAIKAPH GTTLEVPDPD  300
EAVDDPQRRY RIVLRSTMGP IDVYLVSQFE EKIEEMNVVQ TPSSFLHASS SGSNEHLTTE  360
AIIGESSRNE IEPQAQLSQY SSICDVHGSN EFPGGMMKIM PSEIDNDADY WLLSDAEVSI  420
TDMWRTDTDI VWDQSDMVPH DFIISDVSAQ RPRPVSPHSE RGGVPSDVNL RQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	185	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-134	E2F/DP family protein