PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518541.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HB-other
Protein Properties Length: 351aa    MW: 38748.7 Da    PI: 8.6043
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.34.7e-071374655
                    S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS
        Homeobox  6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55
                    +ft+ ++ e+e+  +   n  ps+e    LA k            ++ +qV +WFqNrR+  
  XP_023518541.1 13 RFTAPEVAEMEAILQGhnNTMPSREVLVSLAGKFsesverkgkiAVQMKQVWNWFQNRRYAI 74
                    5888899999999995449999*********99999999999999**************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MGRPPSNGGP AFRFTAPEVA EMEAILQGHN NTMPSREVLV SLAGKFSESV ERKGKIAVQM  60
KQVWNWFQNR RYAIRAKTTK VPGKLAGSPI VQVESTPPRN VPQTIVVPAP TLVGPLKRAS  120
ENPLSEFEAK SGRDGAWYDV ATFLSHRSVE SGDPEVLVRF AGFGSDEDEW VNVRRNIRPR  180
SLPCESSECV AVLPGDLILC FQEGKEQALY FDAHVLDTQR RRHDVRGCRC RFLVRYDHDQ  240
SEEIVQLRKI CRRPETDHRL LQLHAVNEAA SMEPSRSGMD SVLLSGQTIS FEATQKLLNK  300
DATIVIPNAN ANINVHAQTS TQEARNTITN SAPGVFNAGN HAGSSASRAV S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.31e-123HB-other family protein