PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023518533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HB-other | ||||||||
Protein Properties | Length: 351aa MW: 38748.7 Da PI: 8.6043 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 21.3 | 4.7e-07 | 13 | 74 | 6 | 55 |
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55 +ft+ ++ e+e+ + n ps+e LA k ++ +qV +WFqNrR+ XP_023518533.1 13 RFTAPEVAEMEAILQGhnNTMPSREVLVSLAGKFsesverkgkiAVQMKQVWNWFQNRRYAI 74 5888899999999995449999*********99999999999999**************865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MGRPPSNGGP AFRFTAPEVA EMEAILQGHN NTMPSREVLV SLAGKFSESV ERKGKIAVQM 60 KQVWNWFQNR RYAIRAKTTK VPGKLAGSPI VQVESTPPRN VPQTIVVPAP TLVGPLKRAS 120 ENPLSEFEAK SGRDGAWYDV ATFLSHRSVE SGDPEVLVRF AGFGSDEDEW VNVRRNIRPR 180 SLPCESSECV AVLPGDLILC FQEGKEQALY FDAHVLDTQR RRHDVRGCRC RFLVRYDHDQ 240 SEEIVQLRKI CRRPETDHRL LQLHAVNEAA SMEPSRSGMD SVLLSGQTIS FEATQKLLNK 300 DATIVIPNAN ANINVHAQTS TQEARNTITN SAPGVFNAGN HAGSSASRAV S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18380.3 | 1e-123 | HB-other family protein |