PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023518518.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 329aa MW: 36228.2 Da PI: 6.6634 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.3 | 2.8e-05 | 165 | 184 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_023518518.1 165 FSCPVCFKTFNRYNNMQMHM 184 89*****************9 PP | |||||||
2 | zf-C2H2 | 15.7 | 4.4e-05 | 249 | 271 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_023518518.1 249 FTCRKCGKAFAVRGDWRTHEKNC 271 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MADPYSNSLA SLLKFSSLHH HFPQSQPSPS PSHLNMSLNC LPYPYLGSGS GSGSGSGSGS 60 GSPPPSSPPL REALPLLGLI SPPEQRQEQE EEDYGGDDEG NDESVTVALH IGLPSPSTVE 120 MGSSEIDHSN NNDNLDDFGQ STKTLIKGQY WIPTPTQILI GPTQFSCPVC FKTFNRYNNM 180 QMHMWGHGSQ YRKGPESLRG TQPTGMLRLP CYCCAPGCRN NIDHPRAKPL KDFRTLQTHY 240 KRKHGLKPFT CRKCGKAFAV RGDWRTHEKN CGKLWYCICG SDFKHKRSLK DHVKAFGNDH 300 AAYGVGGVDG FGDEEEDDPA SEVEQDNNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-124 | C2H2 family protein |